Avocado is a delicious fruit crop having great economic importance. Understanding the extent of variability present in the existing germplasm is important to identify genotypes with specific traits and their utilization in crop improvement. The information on genetic variability with respect to morphological and biochemical traits in Indian avocados is limited and as it has hindered genetic improvement of the crop. In the current study, 83 avocado accessions from different regions of India were assessed for important 17 morphological and 8 biochemical traits. The results showed the existence of wide variability for traits such as fruit weight (75.88–934.12 g), pulp weight (48.08–736.19 g), seed weight (6.37–32.62 g), FRAP activity (27.65–119.81 mg AEAC/100 g), total carotenoids (0.96–7.17 mg/100 g), oil content (4.91–25.49%) and crude fibre (6.85–20.75%) in the studied accessions. The first three components of principal component analysis explained 54.79 per cent of total variance. Traits such as fruit weight, pulp weight, seed weight, moisture and oil content contributed more significantly towards total variance compared to other traits. The dendrogram constructed based on Euclidean distance wards minimum variance method divided 83 accessions into two major groups and nine sub clusters suggesting wide variability in the accessions with respect to studied traits. In this study, superior accessions for important traits such as fruit size (PA-102, PA-012), high pulp recovery (PA-036, PA-082,), thick peel (PA-084, PA-043, PA-011, PA-008), high carotenoids (PA-026, PA-096) and high oil content (PA-044, PA-043, PA-046, PA-045) were identified which have potential utility in further crop improvement programmes.

Casuarina equisetifolia L. commonly called whistling pine is an economically and industrially important tree species with global significance. Although species possess versatile importance worldwide, efforts imparted for selection and designing a robust model of selection index are inadequate. The selection process, based on quantitative and qualitative traits, identified 15 superior trees from the eastern coastal plain of Odisha. These superior trees showcased exceptional qualitative and quantitative attributes. Correlation analysis highlighted key similarities among various traits like volume and above ground biomass (AGB), volume and diameter at breast height (DBH), DBH and AGB, DBH and Tree Height (TH), crown length (CL), height, AGB and height. Principal component analysis emphasized substantial contributions of traits like DBH, height, CL, crown width, AGB and volume across different clusters. Furthermore, culmination resulted in a comprehensive selection index, integrating both qualitative and quantitative characters, reaching 52.04, signifying superior performance among specific accessions. The current study provides valuable insights into selection and designing optimal selection index of C. equisetifolia, guiding future decisions concerning optimal wood production and resource management.

Tree architecture is an important factor in increasing performance and better garden management of pistachios. In a pistachio breeding programme, the genotypes obtained from five open pollinated populations were evaluated in terms of growth characteristics. Among the evaluated genotypes, ‘Apatiye’ was identified. This genotype has shoots with crouch angle more than 90° and a height of 110 cm. In previous year's shoots, the terminal buds abort and fall in early spring, stimulating more lateral buds to grow (6–7) than other genotypes (3–4). The growth characteristics of ‘Apatiye’ create a valuable potential resource for breeding pistachio cultivars with low alternate bearing, suitable for manual harvesting and pruning management. In addition, ‘Apatiye’ can be used as a suitable genetic marker in the study of heritability of growth habit in pistachio trees for future studies.

Discriminatory morpho-metric features are obvious on legume seeds. This study utilized seven quantitative and 11 qualitative seed traits to characterize 139 African yam bean (AYB) breeding lines which were developed through single seed descent procedure. The seven quantitative data were subjected to analysis of variance, their means were combined with qualitative scores for genetic distance, principal component (PC) and clustering analyses. Significant (P ≤ 0.001) variation existed among the breeding lines for the seven traits. Mean ranges of seed length (SL), width (SW), thickness (ST) and a single seed weight (SSW) among the 139 breeding lines were respectively: 6.77–10.22 mm, 5.70–7.86 mm, 4.96–7.45 mm and 0.15–0.42 g. Positive and significant (P ≤ 0.05) genotypic correlation existed among SSW, SL, SW and ST. Seed colours, pattern, shapes, sizes, surface texture, brilliance varied among the breeding lines. Ranges of phenotypic and genotypic coefficient of variation and broadsense heritability were: 5.49–23.84%, 2.95–19.88% and 28.91–69.54% respectively. Fourteen (quantitative and qualitative) traits contributed higher (≥ 0.30) eigenvector loadings to the first three PC axes which explained 57.9% of the total variation among the breeding lines. Similarity among the lines was 0.75. Four clusters ensued in the dendrograph and each group had genetic similarities of: 0.85 (I), 0.82 (II), 0.78 (III) and 0.80 (IV). This research unveiled significant variation among AYB breeding lines with promising reliability for breeding opportunities of the qualitative and quantitative seed traits, which could contribute to higher grain yield and acceptability.

Pummelo is the largest citrus species in the Rutaceae family and is important for human health and nutrition. This fruit is underutilized and threatened by human activities in its natural habitat. The present research was conducted in the Devanahalli region of Karnataka, which has a vast diversity of pummelo. This study aimed to evaluate 40 pummelo genotypes, selected through a preliminary survey, using morphological, biochemical and sensory assessments. Fruit and pulp weights ranged from 344.03 to 1746.23 g and 194.39 to 1073.07 g, with mean values of 939.67 and 522.81 g, respectively. Traits such as fruit length, diameter, fruit axis diameter, fruit volume, number of segments, rind thickness, fruit, pulp, peel weight, seed weight and seeds per fruit showed highly significant differences. Biochemical analysis revealed that ascorbic acid content varied from 28.53 to 60 mg/100 g, titratable acidity from 0.73 to 2.07% and total soluble solids from 7.63 to 11.07°Brix. High phenol (55.08–166.17 mg GAE/g FW) and flavonoid (39.26–137.78 mg CE/g FW) content were observed in fruit pulp, indicating significant antioxidant potential. Several morphological and biochemical traits exhibited significant positive correlations. A slightly higher phenotypic coefficient of variation was found for all the characters compared to the corresponding genotypic coefficient of variation. The principal component analysis indicated that the first nine components contributed 94.24% of the total variation. Hierarchical cluster analysis divided the populations into two distinct clusters. Sensory analysis indicated that genotypes, DVP-1 and DVP-2 had higher acceptability rates. The significant variations in plant traits among the genotypes offer great chances to select the best ones for genetic improvement programmes.

Perilla is a self-fertilizing crop widely used in East Asia for its seeds and leaves. Of the two varieties of Perilla, P. frutescens var. frutescens has long been used as a folk plant in South Korea. The seeds are rich in unsaturated fatty acids, which offer significant health benefits, making them popular for use in seed oil or as a spice. The leaves, with their high perilla ketone content and unique aroma, are used as leafy vegetables and spices. The morphological characteristics of crops are complex for various reasons, such as environment factors, multiplicity, etc. To better understand the morphological variations among three types of Perilla collected from three regions of South Korea, 7 qualitative traits and 10 quantitative traits were investigated using 500 Perilla accessions. The results of principal component analysis (PCA) indicated that the first two components together explained 52.2% of the overall variation. The 500 Perilla accessions clearly distinguished cultivated var. frutescens from weedy var. crispa and also revealed differences between cultivated and weedy types of var. frutescens. Significant morphological differences were observed among the three types of Perilla, especially in seed and plant characteristics. When the PCA results were analysed by region, regional differences were observed for all three types of Perilla. Therefore, this study provides a better understanding of the morphological and geographical differences in Perilla grown and naturally occurring in South Korea, which will aid research on crop evolution and differentiation, as well as Perilla breeding programmes.

This study investigates the potential of Emblica officinalis Gaertn. (aonla) for cultivation across diverse soil types, with a particular focus on alkaline soils, as part of broader efforts to enhance biodiversity, promote sustainable agriculture and improve climate resilience. This experiment was focused on identifying and characterizing aonla accessions for alkaline conditions. Among the 11 genotypes characterized; CISH-A-33 and CISH-A-31 exhibited superior fruit yield per plant (53.99 ± 1.97 and 44.17 ± 0.91 kg/tree, respectively), indicating better adaptability to alkaline conditions. Additionally, CISH-A-33 genotypes showed higher content of biochemical traits such as total soluble solids (TSS) (9.70 ± 0.10°B), acidity (3.25 ± 0.10%), ascorbic acid (504.65 ± 1.12 mg/100 g), total sugar (8.21 ± 0.05%), reducing sugar (3.85 ± 0.01%), phenol (1.41 ± 0.01 g/100g GAE) and ferric reducing antioxidant power (FRAP) (233.74 ± 1.59 mg/g) followed by CISH-A-31. A correlation study between morphological and biochemical traits indicated that fruit weight was negatively correlated with TSS, ascorbic acid, total sugar and FRAP, but strongly positively correlated with yield, fruit diameter, acidity, reducing sugar and polyphenol content. TSS, total sugar and FRAP had a negative correlation with yield, whereas ascorbic acid, reducing sugar and polyphenols had a favourable correlation. Two principal components (PCs) with differing descriptive capacities were identified by principal component analysis; PC-1 explained 65.89% of the overall variability, while PC-2 explained 29.67%. These promising genotypes (CISH-A-33 and CISH-A-31) hold potential for crop genetic enhancement, benefiting alkaline soils not only in sub-tropical regions of India but also in other similar environments. This research identifies promising aonla accessions adaptable to alkaline soils, offering prospects for breeding climate-resilient varieties with enhanced productivity and fruit quality.

Wild species of rice possess tremendous genetic variations and harbour resistance genes for biotic stresses. Bacterial blight (BB), caused by Xanthomonas oryzae pv. oryzae (Xoo), is a major disease affecting rice production globally. The current study characterized 116 accessions from 17 species of Oryza for BB disease during three seasons viz., kharif 2020, rabi 2020–21, kharif 2021 using an isolate of Xanthomonas oryzae pv. oryzae (Xoo) strain IX-020. A total of 40 accessions including Oryza rufipogon, O. nivara, O. officinalis and O. australiensis showed consistence resistance to the bacterial blight disease across the seasons. These accessions were further subjected to molecular characterization using 11 Xa genes viz., Xa4, xa5, xa13, Xa21, Xa23, Xa27(t), Xa32(t), Xa33, Xa35(t), Xa38 and xa41 with gene-specific markers to ascertain the novelty. Some key resistance genes such as Xa4, Xa23, Xa27(t), Xa32(t), Xa33, Xa35(t) and xa41 were detected in multiple accessions, with O. rufipogon and O. eichingeri harbouring particularly complex combinations of these genes. Notably, several accessions viz., IC521672 (O. nivara), EC861665 (O. officinalis), EC861677 (O. latifolia), EC861711 (O. punctata) and EC861738 (O. eichingeri) did not show the presence of any known genes indicating the possibility of novel genetic loci conferring BB resistance in these wild species. These promising accessions identified in the study are potential novel sources for bacterial leaf blight resistance in rice and will be useful for the development of durable bacterial blight resistance rice cultivars.

Germplasm resources are the foundation for improving crop varieties and a strategic asset for global food security. They also advance plant breeding, agricultural biotechnology and the production of essential agricultural goods. To assess the distribution, diversity and conservation status of food crop germplasm in the Hainan Province, China, we conducted a detailed survey of the Hainan Island. Between 2017 and 2022, we collected 330 food crop germplasm resources, encompassing 16 cereal crops, including rice, maize, sweet potato. The collected germplasm resources exhibited traits of high resistance to both biotic and abiotic stresses, including common diseases and drought stress, as well as superior quality and adaptability to poor soil conditions such as sandy land. However, challenges such as low productivity and hybrid degradation were identified. These resources were primarily found in Haikou City, Baisha County, Danzhou City, Wuzhishan City and Sanya City. Additionally, we collected several ancient local varieties and endangered germplasm resources such as ‘Jiezi rice’ and ‘Wuzhishan maize’. This study serves as a reference for the conservation, development and utilization of local food crop germplasm resources in Hainan Province and lays the foundation for breeding and developing new varieties.

This study examines the morphological and chemical characteristics of seeds from five Fritillaria species: Fritillaria pinardii, Fritillaria pontica, Fritillaria kittaniae, Fritillaria imperialis and Fritillaria alfredae Post subsp. glaucoviridis (Turrill) Rix. Morphological measurements included total length, total width, embryo length, embryo width, seed left-wing coverage width, seed right-wing coverage width and the distance between crossing points. These measurements revealed significant differences among the species. For example, F. imperialis exhibited the longest seeds and the largest embryos, while F. alfredae Post subsp. glaucoviridis had the smallest dimensions. Chemical analyses were conducted using gas chromatography-mass spectrometry, identifying various significant compounds across the species. High proportions of 2,2-dimethoxybutane were found in the seed samples. In F. pontica, compounds such as 2,2-dimethoxybutane (66.33%) and 1,1-dipropoxypropane (13.24%) were prevalent. Fritillaria kittaniae seeds showed high levels of benzene, 1,1′-(3,3-dimethyl-1-butenylidene) bis- (25.57%) and cyclohexene, 3-methyl-6-(1-methylethylidene)- (6.89%). In F. imperialis, significant compounds included 1,3-dioxolane-4-methanol, 2-ethyl-2-methyl (9.73%) and dodecane (5.73%). Fritillaria pinardii had notable amounts of 3,6-dimethyloctane (4.81%), while F. alfredae subsp. glaucoviridis contained 2-methoxyethyl(trimethyl)silane (13.21%). Principal component analysis and cluster analysis revealed clear groupings based on morphological and chemical similarities. Fritillaria pinardii, F. pontica and F. kittaniae formed a cluster due to their similar morphological and chemical characteristics, whereas F. imperialis and F. alfredae subsp. glaucoviridis formed a distinct group. These findings provide valuable insights into the identification and classification of Fritillaria species. Integrating morphological and chemical data can enhance the accurate identification of these species. This study contributes to understanding the natural diversity of Fritillaria species and has implications for ecological studies.

Glucosinolates (GSLs) are significant and specialized metabolites found in Brassicas that have crucial roles in both human and plant defence. The present study investigated sinigrin, progoitrin and glucoerucin in Indian cauliflower genotypes using high-performance liquid chromatography (HPLC). For this, 37 genotypes of cauliflower from early (14), mid-early (6), mid-late (15) and late (2) maturity groups along with broccoli (two) and Sicilian purple (one) were evaluated in randomized block design during 2019–20 and 2020–21. Glucoerucin was predominant in most of the cauliflower genotypes (30), followed by sinigrin (5) and progoitrin (2). It was also prominent in broccoli genotypes. Progoitrin was the principal GLS in Sicilian Purple ‘PC-1 (2.430 μmol/g). In cauliflower, the glucoerucin, progoitrin and sinigrin were ranged from 0.067 to 7.248 μmol/g, 0.001 to 0.849 μmol/g and 0.001 to 3.310 μmol/g, respectively. Pusa Deepali (early), Pusa Sharad (mid-early) and Pusa Shukti (mid-late) were found to be ‘low progoitrin-high glucoerucin’ varieties in their respective groups. In the late group, Pusa Snowball Kt-25 had low progoitrin. Glucoerucin and sinigrin were highest in the mid-early group. Progoitrin was highest in genotypes harvested in the first fortnight of November and the second fortnight of February, whereas sinigrin and glucoerucin were maximum in the genotypes harvested during the second fortnight of November. The K-means clustering identified four clusters, and principal component analysis revealed two principal components. The information on three GLSs in Indian cauliflower will be useful for breeding varieties with desirable GSL profiles for public health and plant defence.