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Genetic diversity, population connectivity, and demographic stability are essential components of self-sustaining populations. Experiences with population management of species in zoos have shown us that achieving these goals can be challenging. Zoo-based science has contributed immensely to our understanding of the intricate and varied physiologies and life-histories of wildlife species and have driven the incorporation of assisted reproductive technologies into population management plans. The inclusion of gene banking in these approaches, predominantly in the form of cryobanked gametes, means that these management strategies can be implemented across longer timescales and greater distances. Here, we provide a brief review and some examples of gene banking research geared toward the systematic and strategic collection of reproductive materials from species in the wild. We do not present here a stand-alone avenue for species conservation, but instead discuss gene banking as a tool that, when combined with adequate species prioritization and threat prediction and mitigation, can improve the effectiveness of strategies for species and ecosystem preservation.
Modern comparative methods in biology are powerful conceptual tools for research seeking to understand adaptive change and character evolution. Their value as a guiding principle lies in the fact that information is explicitly incorporated into an independent phylogenetic framework by which results can be evaluated with respect to origin, direction (polarity), and frequency of character transformations (i.e., gains and losses). The requisite comparisons that can be made require individuals of multiple species that are variously phylogenetically distant from the focal species. The expense and bureaucracy of university animal care facilities, staff, and policies are such that many studies are severely limited, or simply not possible, in the traditional context of an academic research program. By their very nature, herpetological collections of zoos typically contain high levels of species-level diversity, often with multiple individuals of certain species, which are required by the comparative method for statistical rigor. Creative collaborations between zoos and academia have produced a number of research programs that otherwise would not have been possible.
Swimming propagules (embryos and larvae) are a critical component of the life histories of benthic marine animals. Larvae that feed (planktotrophic) have been assumed to swim faster, disperse farther and have more complex behavioural patterns than non-feeding (lecithotrophic) larvae. However, a number of recent studies challenge these early assumptions, suggesting a need to revisit them more formally. The current review presents a quantitative analysis of swimming speed and body size in planktotrophic and lecithotrophic propagules across five major marine phyla (Porifera, Cnidaria, Annelida, Mollusca and Echinodermata). Results of the comparative study showed that swimming speed differences among ciliated propagules can be driven by taxonomy, adult mobility (motile vs sessile) and/or larval nutritional mode. On a phylogenetic level, distinct patterns emerge across phyla and life stages, whereby planktotrophic propagules swim faster in some of them, and lecithotrophic propagules swim faster in others. Interestingly, adults with sessile and sedentary lifestyles produce propagules that swam faster than the propagules produced by motile adults. Understanding similarities and differences among marine propagules associated with different reproductive strategies and adult lifestyles are significant from ecological, evolutionary and applied perspectives. Patterns of swimming can directly impact the dispersal/recruitment potential with incidence on the design of larval rearing methods and marine protected areas.
During the summer of 2013 two scientific surveys (northern, at the beginning of July and southern, at the end of July) were carried out along the eastern Adriatic Sea. In these surveys, ichthyoplankton samples of anchovy (Engraulis encrasicolus, Linnaeus 1758) eggs and larvae were collected. In the whole investigated area, egg and larvae abundance varied from 2.61 to 1040.24 eggs m−2 (geometric mean ± CL: 25.43 ± 1.48 eggs m−2) and 2.73 larvae m−2 to 611.14 larvae m−2 (geometric mean ± CL: 17.07 ± 1.41 larvae m−2), respectively. Higher abundance of anchovy early life stages was noted in the northern part of the investigated area. The length of the collected specimens lay within the range of 2.39–3.68 mm and those individuals were less than 12 h old. Analysis of spatial and temporal distribution of collected anchovy early life stages indicated their higher abundance in areas of upwelling (four areas were distinguished on the eastern Adriatic side). Larger and older specimens were collected at the beginning of July in the northern part of Adriatic indicating that the anchovy population in the Adriatic tends to shift among its spawning centres in this area. In general, anchovy eggs were accompanied by its larvae (r = 0.453, P < 0.05), while statistically significant negative correlation was obtained between egg abundance and temperature (r = −0.380, P < 0.05) as well as sea depth (r = −0.321, P < 0.05).
The present work expands the existing knowledge on M. mola ecology by assessing, for the first time, its abundance (and body size distribution) in the southern waters of Portugal and relating the associated temporal variations with environmental variables. There were significant seasonal differences in abundance, with peaks in spring and autumn and lower values throughout the summer. Ocean sunfish abundance was positively correlated with sea surface temperature and chlorophyll a, indicating that a combination of both temperature and productivity dictates spatial use. Complementarily, the absence of a relationship between abundance and water transparency may reveal a strategy in spatial use favouring a medium-term steady food supply over short-term improved feeding opportunities. Specimens ranged between 31.8 and 230.0 cm (total length), with 98% of all individuals measuring between 31.8 and 59.9 cm. As the vast majority of specimens analysed were immature, seasonal differences in abundance should not be related to spawning.
The horse mussel Modiolus barbatus is a marine benthic bivalve, distributed mainly in the Mediterranean basin, that constitutes a fishery product of high economic importance and a promising candidate for aquaculture. The current study provides the first insights regarding the genetic profile of M. barbatus populations from the eastern Mediterranean, by analysis of a partial segment of the mitochondrial COI gene in individuals collected from five sampling localities within the Aegean Sea. To the best of our knowledge, the derived haplotypes represent the first DNA barcodes of M. barbatus from the entire Mediterranean region. Maximum likelihood phylogenetic analysis revealed that M. barbatus from the North Sea and M. barbatus from the eastern Mediterranean may not belong to the same species and as a consequence, there might be three species of the genus Modiolus in Europe. On the other hand, eastern Mediterranean M. barbatus haplotypes were found to be more closely related to the Asian-Pacific Modiolus species. All geographic populations analysed displayed high levels of genetic diversity, in terms of haplotype and nucleotide diversity and a considerable number of unique alleles. Divergence among populations was found at generally low levels, corresponding with the majority of pairwise Fst values not being significant. These findings suggest no population structure and high levels of gene flow, a common feature observed in marine bivalves with long pelagic larval phases.
The colonization features of ciliate communities have proved to be a useful tool for indicating water quality status in aquatic ecosystems. To determine an optimal water depth for bioassessment using these ecological bioindicators, the colonization process of periphytic ciliates was studied at four depths of 1, 2, 3.5 and 5 m in Chinese coastal waters. Samples were collected at time intervals of 3, 7, 10, 14, 21 and 28 days using glass slides. The periphytic ciliate communities represented similar colonization dynamics from a depth of 1 to 3.5 m: (1) the temporal variability was well fitted to the MacArthur-Wilson and logistic models; (2) the species composition reached an equilibrium during the exposure time periods of 10–14 days; and (3) the maximum abundances were definitely higher at a depth of 1 m than those at 3.5 m. PERMANOVA test revealed that the colonization pattern at 1 m depth was significantly different from those at the other three depths. Results suggest that the colonization dynamics of periphytic ciliates may be influenced by water depth in coastal waters. These findings provide an important reference for establishing an optimal sampling strategy for bioassessment on large spatial/temporal scales in marine ecosystems.
In the modern era, zoos and aquariums fight species extinction, educate communities, and advance learning of animal behaviour. This book features first person stories and scientific reviews to explore ground breaking projects run by these institutions. Large-scale conservation initiatives that benefit multiple species are detailed in the first section, including critical habitat protection, evidence-based techniques to grow animal populations and the design of community education projects. The second section documents how zoos use science to improve the health and welfare of animals in captivity and make difficult management decisions. The section on saving species includes personal tales of efforts to preserve wild populations through rehabilitation, captive breeding, reintroduction, and public outreach. The concluding section details scientific discoveries about animals that would have been impossible without the support of zoos and aquariums. The book is for animal scientists, zoo professionals, educators and researchers worldwide, as well as students of zookeeping and conservation.
Various herbivorous invertebrates in seagrass beds are considered to be generalists in food use and their diets may temporally fluctuate according to the availability of food sources. We assessed whether food sources of herbivorous gastropods vary in a subtropical seagrass bed in Nagura Bay, Ishigaki Island, where coexisting seaweeds grow densely in spring but minimally in summer. Abundant gastropods and their possible food sources were collected in spring and summer of 2013 and 2015, and their stable carbon and nitrogen isotope ratios were measured. Between the two seasons, each possible food source had similar isotopic values, but all the herbivorous gastropod species in summer were more enriched in 13C than the gastropod samples in spring. The mixing models in SIAR (Stable Isotope Analysis in R) showed that the total contribution rates of seaweeds, i.e. rhodophytes, phaeophytes and chlorophytes, for all herbivorous gastropod species decreased from spring to summer; in contrast, the contribution rate of seagrasses increased. Linear Mixed Models showed that the seasonal variation in δ13C of the herbivorous gastropods was larger than that of the possible food sources, adding further evidence to the seasonal change in food sources of the herbivorous gastropods. This seasonal change in food use appears to correspond to the change in seaweed biomass, suggesting that herbivorous gastropods flexibly change their diets depending on food availability.
In the Rio de la Plata salinity, temperature, chlorophyll a (chl a), and densities (ind. m−3) of the copepods Acartia tonsa and Paracalanus parvus were measured from January to November in 2003 by following a nested weekly and monthly design. Such sampling yielded two separate datasets: (i) Yearly Dataset (YD) which consists of data of one sampling effort per month for 11 consecutive months, and (ii) Seasonal Weekly Datasets (SWD) which consists of data of one sampling effort per week of any four consecutive weeks within each season. YD was assumed as a medium-term low-resolution (MTLR) dataset, and SWD as a short-term high-resolution (STHR) dataset. The hypothesis was, the SWD would always capture (shorter scales generally captures more noise in data) more detail variability of copepod populations (quantified through the regression relationships between temporal changes of salinity, temperature, chl a and copepod densities) than the YD. Analysis of both YD and SWD found that A. tonsa density was neither affected by seasonal cycles, nor temporal variability of salinity, temperature and chl a. Thus, compared to STHR sampling, MTLR sampling did not yield any further information of the variability of population densities of the perennial copepod A. tonsa. Analysis of SWD found that during summer and autumn the population densities of P. parvus had a significant positive relationship to salinity but their density was limited by higher chl a concentration; analysis of YD could not yield such detailed ecological information. That hints the effectiveness of STHR sampling over MTLR sampling in capturing details of the variability of population densities of a seasonal copepod species. Considering the institutional resource limitations (e.g. lack of long-term funding, manpower and infrastructure) and the present hypothesis under consideration, the authors suggest that a STHR sampling may provide useful complementary information to interpret results of longer-term natural changes occurring in estuaries.
This study was conducted in February, April and June 2009 at three stations in the southern Adriatic. Occurrence of the dinoflagellate Noctiluca scintillans and tunicates Salpa fusiformis and Salpa maxima in high abundances for the oligotrophic open sea, indicates the importance of physical forcing (vertical mixing) and inflow of nutrient-enriched Atlantic water, due to the Bimodal Oscillating System (BiOS) mechanism, into the Adriatic Sea thus creating an environment favourable for their rapid increase. This is the first time a bloom of N. scintillans has been recorded in the open southern Adriatic (OSA). High abundance of Noctiluca and salp populations in the OSA was characterized by low abundance of phytoplankton and other zooplankton, with obvious trophic implications (reduction of food availability to crustacean primary consumers). Moreover, during the S. maxima bloom in June 2009, calanoid copepods and appendicularians were almost completely absent (<1 ind. m−3).
A massive die-off of benthic suspension feeders (BSF) covered by large amounts of sediments was observed along Prince Islands coasts (north-eastern Sea of Marmara) in August 2015. Alcyonarians, pennatulaceans, bivalves and sponges were severely affected. Many BSF probably died from burial and clogging of their feeding and respiratory apparatus. Of the gorgonian colonies, 66 ± 34% (mean ± SD) were dead, while 15 ± 16% (mean ± SD) displayed recent necrosis on the colony surface. In addition, histopathological and microbial examinations of the affected gorgonians and gold corals (Savalia savaglia) suggest that stress caused by sedimentation made them vulnerable to exploitation by consistently isolated opportunistic microorganisms. We isolated Vibrio splendidus and Vibrio neptunius from diseased gold coral colonies, but the bacterial isolates obtained from gorgonians could only be identified to genus Vibrio level. The presumably artificially introduced fungus Mucor circinelloides was common on both gold coral and gorgonians. This mould and opportunistic bacteria may have colonized BSF by taking advantage of low oxygen levels leading to impaired coral immune responses and thereby exacerbated the BSF mortality. Construction and landfill operations at Yassıada seem to be the greatest contributor to the observed sedimentation, as shown by silicate concentrations in nearby waters. These observations imply that preventive measures are necessary when construction operations take place in the vicinity of sensitive marine habitats.
Thyone and Havelockia are worldwide-distributed genera represented in the Western Atlantic by eight and three species, respectively. In this paper, we describe two new shallow-water species from the Brazilian coast: Thyone waltinhoi sp. nov. and Havelockia oraneae sp. nov. These genera are very similar morphologically but the presence of subdivisions in their calcareous rings separates them into different families, Thyone in Phyllophoridae and Havelockia in Sclerodactylidae. To observe the presence of subdivisions, we submerged the calcareous rings in an iodine solution prior to morphological analyses. Thyone waltinhoi sp. nov. differs from its Western Atlantic congeners in its dermal ossicles and Havelockia oraneae sp. nov. differs from its South-western Atlantic congeners in the composition of its introvert ossicles. In addition to species descriptions, illustrations and morphological diagnoses of both genera are provided, along with a synoptic table of their Western Atlantic species, and a discussion of the taxonomic significance of the dermal ossicles and the calcareous ring.
The effects of trampling are usually confounded by the diffuse impacts of the urbanization of sandy beaches. We performed a controlled experiment on a beach with low visitation rates to test the hypothesis that ghost crabs avoid building their burrows on impacted plots as a result of the compacted sediment, and they migrate to non-trampled areas. The sampling design encompassed 11 survey quadrats (6 × 6 m) above the strandline, including five trampled plots (100, 300, 900, 1500 and 3000 steps) and six non-trampled plots. The plots were sampled before and after 24, 48 and 72 h of experimental trampling. We found that the ghost crabs avoided building their burrows in only the 1500× and 3000× trampled plots after 24 h, but the avoidance was not related to sediment compactness. Additionally, the emersion time and escape distance from humans were significantly delayed in the most trampled plots, suggesting a lower surface activity and an avoidance of irregular (i.e. high micro-relief) sediment surfaces by ghost crabs, which might reduce their ability to perceive potential predators.