Freshwater ecosystems are responsible for a large proportion of global methane emissions to the atmosphere. The radiocarbon (14C) content of this aquatic methane is useful for determining the age and source of this important greenhouse gas. Several methods already exist for the collection of aquatic methane for radiocarbon analysis, but they tend to only sample over short periods of time, which can make them unsuitable for characterizing aquatic methane over longer timespans, and vulnerable to missing short-term events. Here, we describe a new time-integrated method for the collection of aquatic methane that provides samples suitable for radiocarbon analysis, that are representative for periods of up to at least 16 days. We report the results of a suite of tests undertaken to verify the reliability of the method, and the 14C age of aquatic methane from field trials undertaken at sites within Scotland, UK. We believe that this new method provides researchers with a simple approach that is easily deployable and can be used to collect representative time-integrated samples of methane for radiocarbon analysis from a wide range of aquatic environments.

The formation of layer silicates on capsuled bacterial cell walls was studied in freshwater microbial mats. The trends associated with Al, Si, Mn and Fe deposits with capsules are consistent with occurrence of layer silicates with 14, 10 and 7 Å X-ray diffraction (XRD) patterns. Scanning electron microscope and transmission electron microscope (SEM and TEM) observations of the microbial mats revealed the presence of microcolonies of rod- and coccus-shaped bacteria with layer-silicate thin films. Field measurements of pH, temperature and Eh indicated that these conditions for bacterial crystallization of layer silicates and hydrated Fe/Mn oxides in freshwaters are as follows: pH 6.3 to 7.8, 12 to 20 °C and Eh −24 to +200 mV. Glass slides kept for 3 weeks in the beakers with natural freshwater and river sediments were coated with brown materials. These materials were identified as layer silicates and colonized bacteria formed under photosynthetic conditions. The well-developed holdfasts on Leptothrix discophora bacterial cells are mainly associated with poorly crystalline layer silicates and hydrated Fe-Mn oxides. Semiquantitative elemental analyses of holdfasts using energy-dispersive X-rays (EDX) indicated that layer-silicate crystallization covers the cell at an early stage. Iron and manganese crystallization develops at a later stage, where aluminum substitution occurs in crystal structures. Laboratory experimental results indicated that layer silicates grew from a biochemical origin, rather than from inorganic origins in freshwater. Layer-silicate formation is linked with bacteria in microbial mats.

Although protected areas (PAs) play an important role in ecosystem conservation and climate change adaptation, no systematic information is available on PA protection of high-elevation freshwater ecosystems (e.g., lakes and watersheds with glaciers), their biodiversity and their ecosystem services in the tropical Andes. We therefore combined a literature review and map analysis of PAs of International Union for Conservation of Nature (IUCN) and national systems of PAs and freshwater ecosystems. We found that seven national parks were created for water resources protection but were not designed for freshwater conservation (i.e., larger watersheds). High-value biodiversity sites have not been protected, and new local PAs were created due to water resource needs. We quantified 31 Ramsar sites and observed that PAs cover 12% of lakes, 31% of glacial lakes and 12% of the total stream length in the tropical Andes. Additionally, 120 watersheds (average area 631 km2) with glaciers and 40% of the total glacier surface area were covered by PAs. Future research into the role of PAs in ecosystem services provision and more detailed freshwater inventories within and around PAs, especially for those dependent on glacier runoff, will fill key knowledge gaps for freshwater conservation and climate change adaptation in the tropical Andes.

In the light of global biodiversity change and emerging disease, there is an urgent need to establish efficient monitoring programmes of parasites in aquatic ecosystems. However, parasite identification is time-consuming, requires a high degree of taxonomic expertize and in general requires lethal sampling. The use of environmental DNA methodology to identify parasites has the potential to circumvent these limitations. This study evaluates the use of eDNA metabarcoding to detect the presence of all species of nematode and platyhelminth parasites in two New Zealand lakes. We developed two novel metabarcoding primer pairs targeting a region of cytochrome oxidase I gene (COI) specific to platyhelminths and nematodes. We successfully detected parasite DNA in both lakes. Platyhelminth DNA yield was in general greater than nematode DNA yield. This most likely results from the larger biomass of the former quantified using traditional methods, or the presence of free-swimming life stages in the life cycle of many platyhelminths. By using eDNA, we did not detect all expected parasite families revealed through traditional methods, likely due to a lack of sequencing data available from public databases such as GenBank. As such, genetic resources need to include full reference sequences if parasitology is to truly harness eDNA to characterize and monitor parasite biodiversity in natural systems.

The Rufous-throated Dipper Cinclus schulzi is endemic to the Southern Yungas of north-western Argentina and southern Bolivia. The species is categorised as ‘Vulnerable’ on the IUCN Red List on the basis of small population size and restricted range. The purpose of our study was to determine the distribution of potentially suitable habitat for the Rufous-throated Dipper, estimate its population size, and assess potential distribution within strict protected areas, in north-western Argentina. We surveyed 44 rivers in the Southern Yungas of Argentina from 2010 to 2013 to determine dipper density (i.e. the number of individuals detected per km surveyed). The dipper’s potential distribution was assessed using a maximum entropy modeling approach based on 31 occurrence points and eight bioclimatic and two topographic variables as predictors. The species is dependent on mountain forest rivers, so the potential distribution was restricted to rivers. We estimated dipper population size by multiplying density by the potential distribution along rivers. Finally, we calculated the extent of suitable habitat contained within the boundaries of Argentina´s National Parks. Dipper density was 0.94 ± 1.55 individuals/km. We estimate that within north-west Argentina there are ~2,815 km of river that are potential habitat, with an area of occupancy of 141 km2 and a population size of 2,657 ± 4,355 dippers. However, of this river extent, less than 5% is within National Parks. Our results highlight the need to create new and to enlarge existing National Parks that protect the potentially suitable habitat of the species. Although more information is needed for Bolivia, the country-level area of occupancy and population size of the dipper found in Argentina provides strong evidence that the IUCN Red List classification of this species as ‘Vulnerable’ is warranted.

The elk/moose (Alces alces) was an important resource for prehistoric societies. In prehistoric art, it is often depicted in connection with water. Biologists find that elk spend much time in water and consume considerable amounts of aquatic plants. As freshwater plants can have reservoir ages of hundreds or even thousands of years, there is a risk of a significant reservoir effect in elk bones and antler, and artifacts made of these materials. This pilot study followed several approaches to investigate the possibility of a freshwater reservoir effect in elk. I analyzed modern, historical and archaeological bones and antler from several sites across Eurasia. Skull bone and antler of the same individual were radiocarbon dated, as antler is formed in summer, when the proportion of aquatic diet is supposed to be highest. Age offsets measured in this study were zero to about 500 years. A difference between bone and antler could not be determined. The reservoir effect appears to be smaller than estimated from accounts of elk diet, even in regions where a substantial freshwater reservoir effect is expected. Therefore, the hypothesis of a large proportion of aquatic diet can be rejected for several of the individuals studied here.

Invertebrates living in underground environments often have unusual and sometimes unique adaptations and occupy narrow ranges, but there is a lack of knowledge about most micro-endemic cave-dwelling invertebrate species. An illustrative case is that of the flatworm Dendrocoelum italicum, the first survey of which was performed 79 years after its description. The survey revealed that the underground stream supplying water to the pool from which the species was first described had been diverted into a pipe for human use, thus severely reducing the available habitat for the species. Here we describe the results of what we believe is the first habitat restoration action performed in a cave habitat for the conservation of a flatworm. The water-diverting structure was removed, with the involvement of local protected area administrators, citizens and volunteers from local organizations. The intervention resulted in the restoration of a large, stable pool inside the cave, thus creating an optimal habitat for this threatened planarian, with increased availability of prey and a stable population. This report of habitat restoration for a neglected invertebrate offers insights for the protection of other micro-endemic species.

Despite the essentiality of freshwater to all life on the planet, the populous has inadequate understandings of water. Formal education plays a key role in shaping how individuals and communities make sense of water, its accessibility, management, consumption, and hazards. This article seeks to bring attention to the influence of cultural framings of freshwater and extreme freshwater events (such as flood and drought) in government-mandated school curricula in two water-vulnerable geographical regions of Australia and Canada. We seek to identify and respond to hegemonic social constructions that become naturalised if left unexamined. By examining the agendas and language around freshwater and extreme freshwater events in formal educational curricula, we gain a better understanding of the perceptions and assumptions made about freshwater. The results highlight that freshwater and extreme freshwater events are minimally conceptualised within these curricula as ‘nature-based’, rather than being part of a dialectical relationship with societal agendas and practices. This article discusses the implications of this framing and the psychological barriers that may affect the acknowledgment and investigation of extreme freshwater events. We conclude by offering curricular suggestions that invite community-based understandings of the dialectic relationship freshwater has with communities and regional ecosystems.

Considering the impact of coastal dynamics on the radiocarbon (14C) marine reservoir effect (MRE), upwelling has the potential of enhancing marine influence, usually 14C depleted. Freshwater input can contribute either to increased reservoir offsets, when dead carbon from rock weathering is available, but also towards an atmospheric 14C signal, when the presence of terrestrial organic matter from catchment prevails. An overview of the MRE studies based on shellmounds on the coast of Rio de Janeiro reveals a pattern of negative local corrections for Saquarema and Rio das Ostras but positive values for Cabo Frio island, suggesting the presence of cold upwelling waters in Cabo Frio at 1.6–1.2 cal kBP. New results for a shellmound on the Ilha Grande island, in the western portion of the Rio de Janeiro coast, revealed a negative value at about 3 ka. We discuss distribution of MRE values and temporal variability in the region and their relation to ocean dynamics, continental input and the choice of marine organisms used for ∆R determination. A comparison of local reservoir offsets for the Saquarema region obtained from fish otolith and mollusk shells revealed similar ΔR distributions, showing that both materials can be equally used.

Improved multiparameter records from the northern Barents Sea margin show two prominent freshwater pulses into the Arctic Ocean during MIS 5 that significantly disturbed the regional oceanic regime and probably affected global climate. Both pulses are associated with major iceberg-rafted debris (IRD) events, revealing intensive iceberg/sea ice melting. The older meltwater pulse occurred near the MIS 5/6 boundary (∼131,000 yr ago); its ∼2000 year duration and high IRD input accompanied by high illite content suggest a collapse of large-scale Saalian Glaciation in the Arctic Ocean. Movement of this meltwater with the Transpolar Drift current into the Fram Strait probably promoted freshening of Nordic Seas surface water, which may have increased sea-ice formation and significantly reduced deep-water formation. A second pulse of freshwater occurred within MIS 5a (∼77,000 yr ago); its high smectite content and relatively short duration is possibly consistent with sudden discharge of Early Weichselian ice-dammed lakes in northern Siberia as suggested by terrestrial glacial geologic data. The influence of this MIS 5a meltwater pulse has been observed at a number of sites along the Transpolar Drift, through Fram Strait, and into the Nordic Seas; it may well have been a trigger for the North Atlantic cooling event C20.

Marine, freshwater and terrestrial ecosystems face increasing anthropogenic threats that are exacerbated by the ecological connectivity between realms; integrated land-sea management (ILSM) is a framework that can help address this connectivity. However, gaps in our knowledge regarding ILSM remain. This study reviewed 108 relevant studies to understand how ILSM is being utilized. Summarized are: (1) characteristics of integrated land-sea programs; (2) recommendations made from the literature for program planning, implementation and management; (3) how applied programs have been planned, implemented and managed; and (4) recommendations for undertaking ILSM. It was found that applied programs did not often adhere to the strategies recommended by theoretical papers. Applied programs were less likely than theoretical papers to specifically name the land-sea connection, over 50% did not apply a framework or governance approach, many did not include key stakeholders, and over 80% listed at least one conflict or hurdle that decreased program success. This study highlighted the difficulties of undertaking ILSM given the high number of stakeholders, government agencies and experts involved. Based on the findings, recommendations for future ILSM programs are provided.

The taxonomy of species related to Verrucaria praetermissa is investigated using morphological and molecular data. Verrucaria devensis is closely related to V. praetermissa but distinguished by the darker colour, the thinner and more uneven thallus, and the ITS sequence. This species is based on Leucocarpopsis devensis G. Salisb., which was originally described as the type species of a monotypic genus differing from Verrucaria by the absence of dark pigment. Verrucaria lapidicola is a new species from stones in non-aquatic situations; it is related to V. praetermissa and V. elaeina but differs in the very thin thallus and ITS sequence.

Parasites have been considered as natural biological tags of marine fish populations in North America for almost 75 years. In the Northwest Atlantic, the most studied species include Atlantic cod (Gadus morhua), Atlantic herring (Clupea harengus) and the redfishes (Sebastes spp.). In the North Pacific, research has centred primarily on salmonids (Oncorhynchus spp.). However, parasites have been applied as tags for numerous other pelagic and demersal species on both the Atlantic and Pacific coasts. Relatively few studies have been undertaken in the Arctic, and these were designed to discriminate anadromous and resident salmonids (Salvelinus spp.). Although rarely applied in fresh waters, parasites have been used to delineate certain fish stocks within the Great Lakes-St Lawrence River basin. Anisakid nematodes and the copepod Sphyrion lumpi frequently prove useful indicators in the Northwest Atlantic, while myxozoan parasites prove very effective on the coast and open seas of the Pacific Ocean. Relative differences in the ability of parasites to discriminate between fish stocks on the Pacific and Atlantic coasts may be due to oceanographic and bathymetric differences between regions. Molecular techniques used to differentiate populations and species of parasites show promise in future applications in the field.

To understand how fisheries affect parasites, we conducted a meta-analysis of studies that contrasted parasite assemblages in fished and unfished areas. Parasite diversity was lower in hosts from fished areas. Larger hosts had a greater abundance of parasites, suggesting that fishing might reduce the abundance of parasites by selectively removing the largest, most heavily parasitized individuals. After controlling for size, the effect of fishing on parasite abundance varied according to whether the host was fished and the parasite's life cycle. Parasites of unfished hosts were more likely to increase in abundance in response to fishing than were parasites of fished hosts, possibly due to compensatory increases in the abundance of unfished hosts. While complex life cycle parasites tended to decline in abundance in response to fishing, directly transmitted parasites tended to increase. Among complex life cycle parasites, those with fished hosts tended to decline in abundance in response to fishing, while those with unfished hosts tended to increase. However, among directly transmitted parasites, responses did not differ between parasites with and without fished hosts. This work suggests that parasite assemblages are likely to change substantially in composition in increasingly fished ecosystems, and that parasite life history and fishing status of the host are important in predicting the response of individual parasite species or groups to fishing.

In January and February 2009, a series of water samples were collected from streams on Byers Peninsula. These samples were analysed for major elements and δ18O to determine the role of lithology and landscape position on stream geochemistry, and to understand better the hydrology (i.e. residence time of water) of these systems. Precipitation chemistry is enriched in Na+, as are the streams located close to the coast. Streams originating from inland locations have much higher percentages of Ca2+. In contrast, Mg2+ varied little, though streams that are in greater contact with volcanic-derived soils have slightly higher concentrations. Anion percentages varied greatly between streams with SO42- ranging from 5% to 45% of the anion composition. Dissolved Si concentrations as high as 141 μM were observed. All these data suggest that active chemical weathering is occurring in this region. A time series over 13 days at one stream showed little variation in major element geochemistry. The δ18O of precipitation samples collected over this same period varied by ∼10‰ while the majority of stream samples varied less than ∼1.5‰. These data indicate that the stream waters represent mixtures of precipitation events, melting snow and water from the subsurface that had gained solutes through chemical weathering.

Saint-Augustin Lake is an urban lake in Québec, Canada that has been subjected to long periods of direct human impact, mainly due to agricultural and urban activities, with great changes in trophic status and chemistry occurring within the last few decades. In 2009, during an examination of the lake bottom substrate, the presence of the invasive species Cipangopaludina chinensis (Reeve, 1863) was found on floor bottom sediments. The gastropods soft tissues were mineralized and analyzed by ICP-OES. The purpose of this study was to estimate concentrations of heavy metals in C. chinensis, describing the relations of these values with the sediment metal. In gastropod soft tissues the overall common trend in the heavy metal concentrations was revealed in the following order: Fe>Mn>Zn>Cu>As>Ni>Pb>Cd>Cr. Biota-sediment accumulation factors (BSAFs) have shown that C. chinensis cannot be used as a bioindicator of heavy metal pollution and exposure in the Canadian lakes where it is present. In fact, while the sediments of Saint-Augustin Lake are characterized by high metal concentrations, C. chinensis does not have high bioaccumulation factors (BSAFs <1.0). By literature comparison with other aquatic organisms in polluted ecosystems at different latitudes it was possible to affirm that the concentrations of Fe, Mn and Zn in C. chinensis tissues are considerable if compared with these sites.

Physical habitat structure can influence the distribution and abundance of organisms. In rivers, stream drift, a common process originating from the unidirectional water flow, favours the displacement and downstream dispersion of invertebrates. This process could also generate a gradient in infection levels, leading to decreasing numbers of parasites per host as one moves upstream from the river mouth. We tested this hypothesis using 4 trematode species infecting the fish Gobiomorphus breviceps in the Manuherikia River (New Zealand). We analysed the abundance of each trematode infrapopulation as a function of distance from the river junction and fish size by generalized linear models. Our results supported the existence of a longitudinal gradient in trematode abundance along the river with a decreasing downstream-to-upstream continuum. This applied to 3 out of the 4 trematode species studied, suggesting that this might be a common pattern in river populations. Thus, the unidirectional river flow and a major process like drift in lotic systems, that influences the dynamics and distribution of invertebrate hosts, can also affect trematodes. Host properties like habitat preference, and parasite traits, particularly those related to transmission mode can influence the strength of the observed gradient, as may other environmental and biotic factors.

Terrestrial protected areas are often designated in inaccessible high elevation regions, and usually targeted towards conservation of charismatic large mammals and birds. It has been suggested that such protected areas, with partial coverage of riverine habitats, may not be adequate for conservation of freshwater taxa such as fishes. Also, protected areas are often designated in upstream catchments of dam reservoirs, and conservation of freshwater biodiversity is usually not a priority. We investigated the importance of existing protected areas for conservation of stream fishes within and across three dammed and two undammed rivers in the southern Western Ghats, India (a global biodiversity hotspot). Comparisons of stream sites in protected and unprotected areas were restricted to mid elevations because of confounding factors of dams, elevation and stream order. For dammed rivers, endemic and total species richness was significantly higher inside protected areas than unprotected areas. Total fish species richness increased with decreasing elevation and endemic species richness peaked at mid elevations. Species found in comparable stream orders across dammed and undammed midland river reaches were similar. Intensity of threats such as sand mining, dynamite fishing, pollution and introduced invasive fishes was higher in unprotected than in protected areas. Lack of awareness among managers has also led to the occurrence of some threats within protected areas. However, existing protected areas are vital for conservation of endemic fishes. Our results support the need for extending the scope of terrestrial protected areas towards better representation of freshwater ecosystems and biodiversity.