Introduction
Recent advancements in ultrasound technology have significantly shifted the focus of antenatal ultrasound screening toward the critical first trimester of pregnancy. However, this period remains somewhat enigmatic, primarily due to the small size of the developing embryo and the constraints imposed by current scanning technologies. This scenario underscores an acute need for more refined imaging of early embryonic anatomy to enhance our comprehension of this crucial developmental phase.
Innovative imaging techniques are not just pivotal in obtaining superior images for research purposes, but they also play a crucial role in medical education and clinical practice. Enhanced images of embryonic and fetal development are invaluable resources for training professionals like sonographers and fetal surgeons. Moreover, they serve as vital educational tools for parents, especially those expecting a child with a fetal anomaly, helping them to understand and prepare for the challenges ahead.
The creation of resources such as the 3D Embryo Atlas has been a significant step forward in the field of human embryology [Reference de Bakker, de Jong, Hagoort, de Bree, Besselink and de Kanter1]. This, coupled with ongoing research into fetal development, has brought to light the vast extent of what we have yet to learn about our developmental processes. With the increasing reliance on ultrasound screening in the first trimester, there is a growing imperative to comprehensively map fetal anatomical development throughout the entire gestation period [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2].
Imaging Early Pregnancy in High Detail
3-D Ultrasound for In Vivo Imaging
Ultrasound stands out for its ability to provide detailed structural information from the first trimester, coupled with its affordability, widespread availability and real-time examination capabilities. While traditional 2-D ultrasound is commonly used, there is a growing shift toward 3-D ultrasound for anomaly evaluation, volumetric measurements, and surface anatomy visualization, offering the advantage of revisiting stored 3-D volumes. Recent advancements in 3-D-ultrasound technology, including innovative visualization software, have greatly enhanced the clarity and lifelikeness of images, aiding clinicians, students and parents [Reference Shah, Al-Memar, de Bakker, Fourie, Lees and Bourne3]. Additionally, these advancements include see-through 3-D rendering applications that enhance the contrast of internal structures, further improving the utility and accuracy of ultrasound in early pregnancy [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2, Reference Shah, Al-Memar, de Bakker, Fourie, Lees and Bourne3].
Micro-CT Imaging for Ex Vivo Imaging
Microfocus computed tomography (micro-CT), an evolving tool in the biomedical field, offers high-resolution imaging without material disruption, making it useful in various nonmedical fields like precision engineering and geosciences [Reference Docter, Dawood, Jacobs, Hagoort, Oostra and van den Hoff4]. Similar to conventional CT in its use of X-ray attenuation, micro-CT typically involves a fixed radiation source and a rotating sample platform. The application of iodine-based staining, known as diceCT (diffusible iodine-based contrast-enhanced CT), enhances soft-tissue imaging and is increasingly used for studying ex vivo human embryonic and fetal anatomy, having been widely employed in animal research [Reference Dawood, Hagoort, Siadari, Ruijter, Gunst and Lobe5]. The versatility of diceCT is a key advantage, effective across various developmental stages, from 6 to 24 weeks of gestation [Reference Simcock, Shelmerdine, Hutchinson, Sebire and Arthurs6, Reference Shelmerdine, Simcock, Hutchinson, Guy, Ashworth and Seibre7, Reference Lamouroux, Cardoso, Bottero, Gallo, Duraes and Salerno8]. This method provides detailed anatomical insights and has been adopted by multiple research groups as a virtual autopsy tool, particularly beneficial for parents who decline invasive autopsy following fetal loss [Reference Kang, Cos, Guizani, Cannie, Segers and Jani9]. It has been evaluated in prospective studies comparing it to conventional autopsy for gestations up to 20 weeks [Reference Hutchinson, Kang, Shelmerdine, Segers, Lombardi and Cannie10]. Additionally, research demonstrates the feasibility of studying human fetal anatomy as early as eight weeks’ gestation, facilitating virtual autopsies in the early first trimester [Reference Lamouroux, Cardoso, Bottero, Gallo, Duraes and Salerno8]. By obtaining precise phenotypic data, especially from miscarriage specimens, this approach supports reverse phenotyping, enabling the selection of variants of interest in genome-wide analyses [Reference Lamouroux, Cardoso, Bottero, Gallo, Duraes and Salerno8]. This offers the potential for genetic counseling to bereaved parents, adding a layer of support during a difficult time. Additionally, its minimally invasive nature allows for its use on rare or invaluable samples, including those with unique abnormalities or museum specimens [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2].
Scientific Research on Early Pregnancy
In 2017, the Dutch Fetal Biobank was initiated by researchers at the Amsterdam University Medical Center of the University of Amsterdam, the Netherlands [Reference Simcock, Shelmerdine, Hutchinson, Sebire and Arthurs6]. This significant venture, which has since extended its reach to other hospitals across the Netherlands, focuses on collecting embryonic and fetal specimens for medical scientific research. High-resolution imaging techniques are a key part of this research. Acknowledging the sensitive nature of this field, the Dutch Fetal Biobank places a strong emphasis on ethical practices and compliance with all relevant regulations and laws. This includes ensuring that parents are fully informed about the donation process and that all tissue use is conducted respectfully and responsibly [Reference Simcock, Shelmerdine, Hutchinson, Sebire and Arthurs6].
The biobank opens its doors to donations from parents facing a range of circumstances, including elective pregnancy termination, ectopic pregnancy or the birth of an immature fetus. In the affiliated hospitals, gynecologists or midwives discuss the option of donation with the parents, providing detailed information and guiding them through the decision-making process. Importantly, the biobank maintains strict anonymity for the donors, meaning no personal information from the parents is linked to the research tissues [Reference Simcock, Shelmerdine, Hutchinson, Sebire and Arthurs6]. More information can be found at www.3Dhumandevelopment.com.
Imaging Ectopic Pregnancies
Over the past seven years, the Dutch Fetal Biobank has amassed a rare collection of ectopic pregnancies [Reference Dawood, Buijtendijk, Bohly, Gunst, Docter and Pajkrt11], meaning excised fallopian tubes containing complete pregnancies, yolk sac and placental tissue. These specimens undergo micro-CT imaging, producing high-resolution images of human embryos covered by their fetal membranes (Figure 1.1). The first ectopic pregnancy imaged with contrast-enhanced micro-CT offered an ultrahigh resolution of 3 μm, revealing a 3-mm-long embryo with distinguishable features like the otic pit, brain vesicles and heart tube [Reference Dawood and de Bakker12]. When compared to the 3D Embryo Atlas [Reference de Bakker, de Jong, Hagoort, de Bree, Besselink and de Kanter1], it matched a 28-day-old Carnegie stage 12 embryo, equivalent to 6 pregnancy weeks but uniquely showcased in its natural setting with a yolk sac, fetal membranes and in a vascularized fallopian tube. The iodine staining particularly highlighted both maternal and embryonic vessels, including the pharyngeal arch arteries and dorsal aorta. This pioneering and award-winning study highlighted the possibility of using micro-CT imaging to study early embryogenesis within the extraembryonic structures [Reference Dawood and de Bakker12].

A: Volume rendering an overview of the fallopian tube containing the pregnancy. Note the extensive vascularization.

B: The volume rendering has been cropped, which shows the embryo and yolk sac.

C: Details of the embryo and yolk sac, showing the various embryonic structures.
Figure 1.1 Micro-CT images of a human embryo TOP174 at Carnegie stage 14 of about 7 weeks gestation (31–35 days of development) with a crown–rump length of 6 mm. This is the first time ever that a Carnegie stage 14 human embryo has been captured within the intimacy of the fetal membranes.
The Future in Imaging Early Pregnancies
The Use of AI in Ultrasound
Artificial intelligence (AI), particularly deep learning (DL), has made significant strides in the last decade, showing great promise in medical fields that rely heavily on imaging. Artificial intelligence’s application in fetal imaging has been the subject of recent reviews and various studies, focusing on uses like fetal diagnosis and estimating gestational age. Most of these studies emphasize implementing DL in 2-D ultrasound, such as automatic detection of 2-D planes, probe-motion tracking and enhancing biometric measurements such as head circumference [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2].
Artificial intelligence is expected to further enhance embryonic and fetal imaging, particularly in complex classifications and diagnosing congenital defects. We anticipate that AI, trained on models like those from the 3D Embryo Atlas, could assist sonographers in analyzing 2-D and 3-D fetal images. This would involve comparing real-time scans with existing models to identify deviations in fetal anatomy, potentially indicating birth defects. The integration of AI in prenatal imaging promises to improve the detection of congenital abnormalities, leading to better prenatal diagnosis and enhanced postnatal care [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2].
Synchrotron Imaging
Synchrotron radiation-based X-ray phase-contrast tomography (sCT) is emerging as a promising technique for ex vivo embryonic and fetal imaging. This method is based on the principle that both amplitude and phase of an X-ray beam are altered as they pass through an object [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2].
The key advantage of sCT lies in its sensitivity to X-ray phase shifts, which provides clear visualization of soft tissues at a micrometer resolution, without the need for contrast agents or staining, positions it as an invaluable tool in biomedical research. This technique offers detailed insights into embryonic and fetal structures, potentially revolutionizing our understanding of early human development [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2].
Conclusion
Since Leonardo da Vinci’s pioneering depiction of a fetus in utero, imaging technology has significantly advanced, providing deeper insights into embryonic development [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2]. Despite these advancements, the early first trimester remains challenging due to the embryo’s small size. To enhance our understanding, combining ultrasound with ex vivo methods like micro-CT is crucial for detailed fetal structure analysis. This, along with large-scale data sharing, sets the stage for integrating AI in ultrasound, potentially enabling the automatic detection of abnormalities in 3-D ultrasound and thus improving the identification of congenital anomalies in these critical early stages of development [Reference Dawood, Buijtendijk, Shah, Smit, Jacobs and Hagoort2].


