Aboulmouna, Lina Gupta, Shakti Maurya, Mano R. DeVilbiss, Frank T. Subramaniam, Shankar and Ramkrishna, Doraiswami 2018. A Cybernetic Approach to Modeling Lipid Metabolism in Mammalian Cells. Processes, Vol. 6, Issue. 8, p. 126.

Song, Hyun-Seob Stegen, James C. Graham, Emily B. Lee, Joon-Yong Garayburu-Caruso, Vanessa A. Nelson, William C. Chen, Xingyuan Moulton, J. David and Scheibe, Timothy D. 2020. Representing Organic Matter Thermodynamics in Biogeochemical Reactions via Substrate-Explicit Modeling. Frontiers in Microbiology, Vol. 11, Issue. ,

Roy, Jyotirmoy Heath, Samuel M. Wang, Shiyan and Ramkrishna, Doraiswami 2022. Modeling COVID-19 transmission between age groups in the United States considering virus mutations, vaccinations, and reinfection. Scientific Reports, Vol. 12, Issue. 1,

Aboulmouna, Lina Khanum, Sana Heidari, Mohsen Raja, Rubesh Gupta, Shakti Maurya, Mano R. Grama, Ananth Subramaniam, Shankar and Ramkrishna, Doraiswami 2023. Mathematical Modeling of Eicosanoid Metabolism in Macrophage Cells: Cybernetic Framework Combined with Novel Information-Theoretic Approaches. Processes, Vol. 11, Issue. 3, p. 874.

Song, Hyun-Seob Ahamed, Firnaaz Lee, Joon-Yong Henry, Christopher S. Edirisinghe, Janaka N. Nelson, William C. Chen, Xingyuan Moulton, J. David and Scheibe, Timothy D. 2025. Coupling flux balance analysis with reactive transport modeling through machine learning for rapid and stable simulation of microbial metabolic switching. Scientific Reports, Vol. 15, Issue. 1,