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7 - Dynamical Systems Model of Cell Differentiation

Published online by Cambridge University Press:  05 June 2025

Hiroaki Takagi
Affiliation:
Nara Medical University
Chikara Furusawa
Affiliation:
The University of Tokyo
Satoshi Sawai
Affiliation:
The University of Tokyo
Kunihiko Kaneko
Affiliation:
Copenhagen University
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Summary

In this chapter, we discuss dynamical system approaches for cellular differentiation. We explain how intracellular reaction dynamics can give rise to various attractors using a simple discrete-time and discrete-state reaction model known as a Boolean network. Subsequently, we outline the behavior of a simple stochastic differentiation model of stem cells, where the scaling law discovered therein aligns well with that observed in the distribution of clonal cell populations generated by epidermal stem cells. To integate both approaches, we introduce a theory wherein cell–cell interactions induce transitions between attractors, and stability at the cell-population level emerges through the regulation of these dynamic transitions. Such a circular relationship satisfies the consistency between the cell and the cell population. We expound on three types of differentiation processes, that by Turing instability, transition from an oscillatory state (limit-cycle) to a fixed point, and retaining oscillatory expression dynamics. Additionally, we analyze stability at the cell population level through the regulation of differentiation ratios and the differentiation dynamics of stem cells. Finally, we engage in a discussion of unresolved issues in the field.

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Chapter
Information
Theoretical Biology of the Cell
A Dynamical-Systems Perspective
, pp. 205 - 228
Publisher: Cambridge University Press
Print publication year: 2025

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