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We show that the fundamental groups of smooth $4$-manifolds that admit geometric decompositions in the sense of Thurston have asymptotic dimension at most four, and equal to four when aspherical. We also show that closed $3$-manifold groups have asymptotic dimension at most three. Our proof method yields that the asymptotic dimension of closed $3$-dimensional Alexandrov spaces is at most three. Thus, we obtain that the Novikov conjecture holds for closed $4$-manifolds with such a geometric decomposition and for closed $3$-dimensional Alexandrov spaces. Consequences of these results include a vanishing result for the Yamabe invariant of certain $0$-surgered geometric $4$-manifolds and the existence of zero in the spectrum of aspherical smooth $4$-manifolds with a geometric decomposition.
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