Deep-sea trawl samples collected from the west coast of India have revealed several previously undetected species inhabiting the deep waters. This study reports the first record of Bathycongrus nasicus from the western Indian waters and the second record from the entire western Indian Ocean. A single specimen of B. nasicus was collected from the Neendakara fishery harbour in southern Kerala. The species identity was confirmed morphometrically by comparing it with previous records, and the study provides the first molecular identification of this rare congrid eel. The presence of B. nasicus in the western Indian waters suggests its potential distribution throughout the northern Indian Ocean, with prior records from the Bay of Bengal and the western Arabian Sea. This new record indicates that there might be occurrences of several previously unknown fish species in the non-commercial fishery of this region, underscoring the importance of survey collections of non-commercial fishes, which play a crucial role in marine ecosystems.

Hookworms are common parasites of Eurasian badgers (Meles meles), typically identified as Uncinaria criniformis. The taxonomic distinction from Uncinaria stenocephala, a species found in dogs and foxes, has long been debated. In this study, we molecularly characterized U. criniformis from a Eurasian badger in Romania using genome skimming. We assembled the complete mitochondrial genome and internal transcribed spacer (ITS) rDNA region from 2 adult hookworms morphologically consistent with U. criniformis. Phylogenetic analysis of 12 mitochondrial protein-coding genes demonstrated strongly supported clade of U. criniformis with Ancylostoma spp. ITS rDNA and cox1 sequence comparisons revealed only 92.4–92.8% and 88.0–88.5% identity, respectively, between U. criniformis and U. stenocephala, confirming their molecular distinctiveness. In contrast, our sequences showed >99% identity to sequences from Arthrostoma leucurus, a hookworm recently described from the Asian badger (Meles leucurus), suggesting conspecificity. These findings support the validity of U. criniformis as a distinct species parasitizing M. meles, and we propose A. leucurus as a junior synonym of U. criniformis. Our results highlight the polyphyly of the genus Uncinaria and point to the need for broader mitogenomic sampling of hookworms. The molecular markers generated here provide a reference for future parasitological surveys and wildlife disease studies.

Fjord ecosystems serve as crucial habitats for elasmobranchs, supporting them across all life stages. Chilean Patagonia provides one of the most complex and extensive networks of fjord ecosystems in the world, displaying high marine biodiversity, including elasmobranchs. However, little is known about this ecologically important group of fishes in these ecosystems. This study investigates the biodiversity of elasmobranchs in the Comau Fjord over a period of 6 months by combining morphological and molecular data. In total, 309 specimens within a radius of 7.5 km were recorded, belonging to six families and nine species: Hexanchus griseus (77.5–178 cm LT), Notorynchus cepedianus (180.6 cm LT), Schroederichthys bivius (35–65.2 cm LT), Scymnodon macracanthus (37.3 cm LT), Centrophorus squamosus (87.4 cm LT), Deania calceus (58.3–98.6 cm LT), Squalus acanthias (25.5–101.1 cm LT), Dipturus chilensis (62.9–152 cm LT), and Dipturus trachyderma (69.8–194 cm LT). This included records of three species previously unknown in the fjord and was equivalent to nearly 20% of the elasmobranch richness found in Southern Chile. The results further suggest that the Comau Fjord could be a primary nursery ground for several species of elasmobranchs. This is the first time that a species inventory of elasmobranchs is conducted in a Chilean fjord system. The outcomes of this research provide an elasmobranch species checklist with biological aspects from the Comau Fjord, which are essential data to inform decision makers, conservation managers, and future research.

Marine parasites remain understudied in South Africa with little information available on their diversity and the effects these parasites may have on their hosts. This is especially true for parasitic copepods within the family Ergasilidae. Among the 4 genera known in Africa, Ergasilus Nordmann, 1832 is the most speciose with 19 reported species. However, this represents only 12% (19/163) of the global diversity. Furthermore, only 5 known African species are reported from marine environments, and only 1 is reported from the South African coastline. Given the rich biodiversity along this coastline, a high marine parasite diversity could be expected from these shores. As a case study, the Evileye blaasop, Amblyrhynchote honckenii (Bloch), a marine and brackish fish species, was screened for parasites along the South African coastline. This resulted in the discovery of 2 species of Ergasilus new to science (Ergasilus arenalbus n. sp. and Ergasilus chintensis n. sp.), which makes them the second and third ergasilid species reported for tetraodontid pufferfishes worldwide. Although genetically distinct, the 2 newly described species clustered in the same subclade within the Ergasilidae based on 18S rDNA, 28S rDNA and COI mtDNA phylogenies. The newly described species differ morphologically from each other, and their respective congeners based on the size and armature of the antenna; body segmentation; and general ornamentation throughout the entire body. The addition of these 2 new species from a single host species indicates that South Africa's marine fishes contain most probably a hidden parasitic copepod diversity that is worth exploring.

Calicium poculatum and Ramboldia canadensis are described as new species occurring on Larix laricina. Calicium poculatum, currently known from four Canadian provinces and the US state of Minnesota, is characterized by its short-stalked black ascomata, short ascospores and occurrence as a parasite on Lecanora caesiorubella subsp. saximontana. Based on DNA sequence data, its nearest relative is the likewise parasitic Calicium episcalaris. Ramboldia canadensis, currently known only from dead wood of Larix laricina snags in Canada, engages in a fully developed lichen symbiosis with Trebouxia simplex and is characterized in statu symbiotico by having a rimose to verrucose-areolate, greyish creamy sorediate thallus with dark brown to blackish soredia that begin on the margins, and the occurrence of a secondary metabolite similar to barbatolic acid. Phylogenetic analysis recovers it as sibling to a clade of the genus heretofore known only from the Southern Hemisphere and the lower latitudes of the Northern Hemisphere. We also report Lecidella xylophila as new to North America.

Three fish blood flukes (Aporocotylidae Odhner, 1912) infect mullets (Mugiliformes: Mugilidae): Cardicola mugilis Yamaguti, 1970 and Plethorchis acanthus Martin, 1975 infect striped mullet, Mugil cephalus Linnaeus, 1758 in the Central Pacific Ocean (Hawaiian Islands) and Brisbane River (Australia), respectively; Cardicola brasiliensis Knoff & Amato, 1992 infects Lebranche mullet, Mugil liza Valenciennes, 1836 from the Southwestern Atlantic Ocean (Brazil). White mullets were cast-netted from the mouth of Deer River, a coastal saltmarsh of Mobile Bay, in the north-central Gulf of Mexico and examined for blood fluke infections. Specimens of Mugilitrema labowskiae Warren & Bullard n. gen., n. sp. were found infecting the endocardial surface and inter-trabecular spaces of the atrium, ventricle, and bulbous arteriosus. The new genus and species differ from all other aporocotylids by having the combination of two post-caecal testes, a uterus with straight ascending and descending portions, and a common genital pore. The 28S analysis recovered the new species and P. acanthus as sister taxa and Aporocotylidae as monophyletic. Carditis associated with intense infections comprised endocardial hyperplasia, resulting in a thickened cardiac endothelium. Probable dead or deteriorating eggs in the myocardium were encapsulated by granulomas composed of epithelioid histiocytes. Live eggs infected the afferent artery of gill filaments and were associated with varied hyperplasia of the overlying epithelium and haemorrhaging from the afferent artery in high-intensity infections. The new species is the first aporocotylid infecting a mullet from the northwestern Atlantic Ocean and only the second description of demonstrable endocarditis attributed to an adult fish blood fluke infection.

Luidia iwakiensis n. sp. (Asteroidea, Echinodermata) is described in Japanese waters. A molecular phylogenetic analysis including 18 Luidia species supported Döderlein L (1920, Siboga Expedition 4, 193–291) four morphogroups. Morphological reconsideration revealed three of the eight criteria of the morphogroup adopted by Döderlein were justified, but the remaining five characters were rejected. The placement of the new species in the Ciliaris-group was supported by molecular as well as morphological evidence, however, it varies from other species of Ciliaris-group by arm number, length of major inferomarginal spines, and pedicellariae on actinal plates.

Previous work has proposed various mechanisms by which the environment may affect the emergence of linguistic features. For example, dry air may cause careful control of pitch to be more effortful, and so affect the emergence of linguistic distinctions that rely on pitch such as lexical tone or vowel inventories. Criticisms of these proposals point out that there are both historical and geographic confounds that need to be controlled for. We take a causal inference approach to this problem to design the most detailed test of the theory to date. We analyse languages from the Bantu language family, using a prior geographic–phylogenetic tree of relationships to establish where and when languages were spoken. This is combined with estimates of humidity for those times and places, taken from historical climate models. We then estimate the strength of causal relationships in a causal path model, controlling for various influences of inheritance and borrowing. We find no evidence to support the previous claims that humidity affects the emergence of lexical tone. This study shows how using causal inference approaches lets us test complex causal claims about the cultural evolution of language.

In the present contribution we report, for the first time, records of the nudibranch Zelentia ninel from Norway. The species is previously known only from the Barents Sea coast in northern Russia where it was described for the first time in 2017. Records of Z. ninel from six different localities in northern Norway from 2019–2023 are presented and discussed. The identity of the specimens was determined by investigation of external and internal morphology as well as molecular analysis of preserved specimens. Photographs of live specimens and radulae of preserved specimens are presented, and species delimitation is confirmed by molecular phylogenetic analysis. In order to assess the biogeographic distribution of Z. ninel based on all available information, recent unanticipated genetic data supporting a putative occurrence of Z. ninel at the Aleutian Islands, Alaska is also discussed where we provide arguments in support of occasional anthropogenic transportation outside its natural range. The present records significantly expand the known natural range of distribution for Z. ninel and demonstrate that the species is not restricted to the Russian Barents Sea coast but that the range encompasses also at least northern Norway. These data can provide important insights to the understanding of natural ranges of marine invertebrates across biogeographical regions affected by rapid ongoing climatic change.

Cardillo M (2023). Phylogenetic diversity in conservation: A brief history, critical overview, and challenges to progress. Cambridge Prisms: Extinction 1, e11.

Host–parasite associations provide a benchmark for investigating evolutionary arms races and antagonistic coevolution. However, potential ecological mechanisms underlying such associations are difficult to unravel. In particular, local adaptations of hosts and/or parasites may hamper reliable inferences of host–parasite relationships and the specialist–generalist definitions of parasite lineages, making it problematic to understand such relationships on a global scale. Phylogenetic methods were used to investigate co-phylogenetic patterns between vector-borne parasites of the genus Haemoproteus and their passeriform hosts, to infer the ecological interactions of parasites and hosts that may have driven the evolution of both groups in a local geographic domain. As several Haemoproteus lineages were only detected once, and given the occurrence of a single extreme generalist, the effect of removing individual lineages on the co-phylogeny pattern was tested. When all lineages were included, and when all singly detected lineages were removed, there was no convincing evidence for host–parasite co-phylogeny. However, when only the generalist lineage was removed, strong support for co-phylogeny was indicated, and ecological interactions could be successfully inferred. This study exemplifies the importance of identifying locally abundant lineages when sampling host–parasite systems, to provide reliable insights into the precise mechanisms underlying host–parasite interactions.

Species that are evolutionarily distinct have long been valued for their unique and irreplaceable contribution to biodiversity. About 30 years ago, this idea was extended to the concept of phylogenetic diversity (PD): a quantitative, continuous-scale index of conservation value for a set of species, calculated by summing the phylogenetic branch lengths that connect them. This way of capturing evolutionary history has opened new opportunities for analysis, and has therefore generated a huge academic literature, but to date has had only limited impact on conservation practice or policy. In this review, I present a brief historical overview of PD research. I then examine the empirical evidence for the primary rationale of PD that it is the best proxy for “feature diversity,” which includes both known and unknown phenotypic characters, contributing to utilitarian value, ecosystem function, future resilience, and evolutionary potential. Surprisingly, it is only relatively recently that this rationale has been subject to systematic empirical scrutiny, and to date, there are mixed results on the connection between PD and phenotypic diversity. Finally, I examine the least well-studied, but potentially greatest challenge for PD: its dependence on the reliability of phylogenetic inference itself. The very few studies that have investigated this so far show that the ranking of species assemblages by their PD values can vary substantially under alternative, routine, phylogenetic methods and assumptions. If PD is to become more widely adopted into conservation decision-making, it will be important to better understand the conditions under which it performs well, and those under which it performs poorly.

A new species in the genus Phaeophyscia is described from Azad Jammu and Kashmir, Pakistan, supported by nrITS sequences, morphology and chemistry. The taxon is characterized by a green to greyish green thallus, usually narrow (0.5–2 mm), flat to convex lobes with abundant marginal soralia, black, dense small rhizines, small Physcia-type ascospores 18–22 × 8–10 μm and an absence of pycnidia. Differences from related species are discussed.

Nematodes constitute one of the most speciose metazoan groups on earth, and a significant proportion of them have parasitic life styles. Zooparasitic nematodes have zoonotic, commercial and ecological significance within natural systems. Due to their generally small size and hidden nature within their hosts, and the fact that species discrimination using traditional morphological characteristics is often challenging, their biodiversity is not well known, especially within marine ecosystems. For instance, the majority of New Zealand's marine animals have never been the subject of nematode studies, and many currently known nematodes in New Zealand await confirmation of their species identity with modern taxonomic techniques. In this study, we present the results of an extensive biodiversity survey and phylogenetic analyses of parasitic nematodes infecting New Zealand's marine animals. We used genetic data to differentiate nematodes to the lowest taxonomic level possible and present phylogenies of the dominant clades to illustrate their genetic diversity in New Zealand. Our findings reveal a high diversity of parasitic nematodes (23 taxa) infecting New Zealand's marine animals (62 of 94 free-living animal species investigated). The novel data collected here provide a solid baseline for future assessments of change in diversity and distribution of parasitic nematodes.

Local cultivars of pearl millet in Saudi Arabia are known to tolerate extreme heat and drought stress. In the current study, the sequences of internal-transcribed spacers (ITSs) of six pearl millet cultivars were sequenced and analysed to investigate the genetic diversity among the local cultivars. The nucleotide polymorphism, secondary structures and phylogenetics were analysed for ITS sequences of the six local cultivars. The obtained sequences were 772–774 base pairs (bp) in length, including complete sequences of the ITS1–5.8S–ITS2 region and partial sequences of 18S and 26S rRNA. The nucleotide diversity among cultivars was higher in ITS2 sequences than ITS1 sequences. The ITS2 had four variable nucleotide sites in three native cultivars, whereas the ITS1 contained one base insertion. The secondary structures of the ITS1 and 5.8S region were highly conserved among the six cultivars and contained some motifs that are conserved across Viridiplantae. However, the ITS2 secondary structure for the two native cultivars, Sayah and Jazan, was distinct from the other cultivars, which confirms the applicability of the ITS2 sequence in distinguishing between genetically close taxa. Additionally, the phylogenetic analysis of the six investigated cultivars and 31 pearl millet accessions from the NCBI database showed close relationships between the local accessions and NCBI accessions from India and France. However, the local cultivar Sayah appeared to be distinct from the other cultivars in the phylogenetic trees. This study provides insights into the polymorphism within local pearl millet cultivars which is important for the identification and conservation of these cultivars.

A new nematode species, Raphidascaris mundeswariensis n. sp. (Raphidascarididae), is described from male and female specimens found in the intestines of the mudskipper Apocryptes bato (Hamilton, 1822) (Gobiidae) from the Mundeswari River of West Bengal, India. This species is distinguished from its congeners by 214–255-μm-long spicules, 14 pairs of preanal papillae of two markedly different sizes, one pair of adanal papillae, six pairs of postanal papillae and the absence of lateral alae. Phylogenetic analyses using partial sequences of the 28S ribosomal RNA gene place the new species in a clade containing Raphidascaris gigi, Raphidascaris lophii, Raphidascaris longispicula and two species of Hysterothylacium. The molecular analyses also corroborate results of previous studies that have found Raphidascaris and Hysterothylacium to be paraphyletic. The finding of R. mundeswariensis in A. bato is the first Raphidascaris species described from a mudskipper anywhere.

The COVID-19 pandemic presents opportunities and challenges for historians working on the global history of health and disease. This article argues that the history of disease will benefit from interdisciplinary work that brings together historians, microbiologists, and archaeologists. Genomes are historical archives, in two complementary ways. Palaeogenomics provide direct access to genomes of the past, while phylogenetics furnish historical insight from evolutionary relationships. Both palaeogenomics and phylogenetics have already contributed enormously to the history of disease, helping us understand how human ecological transformation drives the evolution of our microparasites.